Information for 7-TTCTTACTCC (Motif 11)

A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C T A G C G A T C T G A C G T A A C T G C G T A C T G A
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.875
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif89.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets43.1 +/- 24.2bp
Average Position of motif in Background53.3 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTACTCC------
NTTGTTAATCCCTCTNN
 A C G T A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTACTCC-----
GNNNATTAATCCCTNCN
 A C G T A C G T A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTCTTACTCC-
---TTAATCCT
 A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTACTCC------
ATAGTTAATCCCCCNNA
 A C G T A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTCTTACTCC-
--CTTAATCCC
 A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTACTCC-----
GANNATTAATCCCTNNN
 A C G T A C G T A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTACTCC------
NNNATTAATCCGNTTNA
 A C G T A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCTTACTCC------
NNNATTAATCCGNTTNA
 A C G T A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCTTACTCC-
---TTAATCCC
 A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTCTTACTCC--
--NYTAATCCYB
 A G C T C G A T A G T C A C G T A G C T G C T A A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T