Information for 7-CCTGGTTTGCTTG (Motif 9)

A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A T G C G T C A C G T A G T C A A G T C A T G C C G T A A T C G A C T G
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.8 +/- 20.9bp
Average Position of motif in Background57.7 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG---
------TTGCGTGCVA
 A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG-
------TTGATTGN
 A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG----
-----TTTGATTGATGN
 A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGTTTGCTTG--
NGTAGGTTGGCATNNN
 A C G T A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Znf423/MA0116.1/Jaspar

Match Rank:5
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGTTTGCTTG
GCACCCCTGGGTGCC---
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGTTTGCTTG-
GYCTGGYYTNTGTCA
 A C G T A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG
-CCGATTGGCT--
 A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CCTGGTTTGCTTG
-------TGCGTG
 A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG-----
-NNNNGTTGATTGGGTCG
 A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CCTGGTTTGCTTG
---GGTTGGCAT-
 A G T C A T G C A C G T A T C G A C T G A C G T A C G T A C G T A T C G A G T C A C G T A C G T A C T G
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T