Information for 2-TGCAGGCGCGGAAGCC (Motif 4)

A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
Reverse Opposite:
C T A G A C T G G T A C A G C T A G C T A G T C G A T C A C T G A T G C A C T G A T G C A G T C G A C T A C T G A G T C T G C A
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.747
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif91.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets50.5 +/- 24.9bp
Average Position of motif in Background47.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGGCGCGGAAGCC
ANTGCGGGGGCGGN----
 A C G T A C G T A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:TGCAGGCGCGGAAGCC
---------NGAAGC-
 A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCAGGCGCGGAAGCC
GGCGGGGGCGGGGG--
 A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TGCAGGCGCGGAAGCC-
-----NCGCGGACGTTG
 A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGCAGGCGCGGAAGCC
-----GGGCGGGACC-
 A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

ETV6/MA0645.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TGCAGGCGCGGAAGCC
------AGCGGAAGTG
 A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGCGCGGAAGCC
SDGCAGGTGCNS-----
 A C G T A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGCAGGCGCGGAAGCC
-----ANCCGGAAGT-
 A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
A C G T A C G T A C G T A C G T A C G T C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGCGCGGAAGCC
GCGCATGCGCAG-----
 A C G T A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGGCGCGGAAGCC
TGCGCAGGCGC-------
 A C G T A C G T A C G T C T A G T A G C C T G A A C T G T A C G T A G C A T C G T A G C C T A G A C T G T C G A T C G A A C T G G T A C A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T