Information for 1-CTGTCCCTGCGCC (Motif 2)

A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G G T A C G T C A A T C G A C T G A C T G C G T A A G T C C G T A A C T G
p-value:1e-18
log p-value:-4.192e+01
Information Content per bp:1.896
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 26.7bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGTCCCTGCGCC
CTGTTCCTGG---
 A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGTCCCTGCGCC
CTGCGCATGCGC-
 A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTGTCCCTGCGCC---
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGTCCCTGCGCC
--GCGCCTGCGCA
 A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGTCCCTGCGCC
GTGCGCATGCGC-
 A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTGTCCCTGCGCC
-----AGCGCGCC
 A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGTCCCTGCGCC-----
---TGCCTGCGYCMCCTT
 A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCCTGCGCC--
CTTGGCANNNTGCCAA
 A C G T A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCCTGCGCC
GCTGTG--------
 A C G T A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTGTCCCTGCGCC
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A G T C C G A T A C T G A C G T G T A C G T A C A T G C A C G T A C T G A G T C A C T G A G T C A G T C
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G