Information for 8-CACGCCAGGCACT (Motif 10)

A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C T G A C T G G T A C A C T G A C G T A C T G
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 9.1bp
Average Position of motif in Background55.1 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CACGCCAGGCACT
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACGCCAGGCACT
ATCACCCCAT-----
 A C G T A C G T A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CACGCCAGGCACT
CNGTCACGCCAC-----
 A C G T A C G T A C G T A C G T A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACGCCAGGCACT
-ATGCCAGACN--
 A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CACGCCAGGCACT----
--GACCACGCCCTTATT
 A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CACGCCAGGCACT
ATCACCCCAT-----
 A C G T A C G T A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CACGCCAGGCACT---
------AAGCACTTAA
 A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACGCCAGGCACT
TBGCACGCAA------
 A C G T A C G T A C G T A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CACGCCAGGCACT---
------AASCACTCAA
 A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACGCCAGGCACT
ATCACCCCAC-----
 A C G T A C G T A G T C G T C A A G T C A C T G A G T C A G T C C G T A A C T G A C T G A G T C G T C A A G T C A C G T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T