Information for 8-GGCAGAGAGCAGTTGC (Motif 12)

A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C G T C A C G T A G T A C A C G T A C T G A G T C A C G T G T A C A C G T A G T C C G A T A C T G A G T C A G T C
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 27.5bp
Average Position of motif in Background58.7 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0047.1_Myf6_1/Jaspar

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGCAGAGAGCAGTTGC---
---GAAGAACAGGTGTCCG
 A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCAGAGAGCAGTTGC----
---NNNNAGCAGCTGCTGAN
 A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GGCAGAGAGCAGTTGC--
------SDGCAGGTGCNS
 A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGCAGAGAGCAGTTGC-
-------CGCAGCTGCG
 A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GGCAGAGAGCAGTTGC-
-------AGCAGCTGCT
 A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCAGAGAGCAGTTGC
TAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGCAGAGAGCAGTTGC-
----NGNGACAGCTGCN
 A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAGAGCAGTTGC
GTAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGCAGAGAGCAGTTGC-
-----NNAGCAGCTGCT
 A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGAGAGCAGTTGC
TGGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A A C T G C G T A A C T G C G T A A C T G G T A C C G T A A C T G A C G T A C G T A T C G A G T C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T A C G T