Information for 5-CCYCGVGCATCSVGGT (Motif 5)

A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
Reverse Opposite:
G T C A A G T C G A T C A C T G A T G C A C T G T G C A A C G T A C T G A G T C A G C T A G T C A C T G C T A G A C T G A T C G
p-value:1e-11
log p-value:-2.657e+01
Information Content per bp:1.777
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 30.4bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCYCGVGCATCSVGGT
-----TACATCCGGGT
 A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCYCGVGCATCSVGGT
-GCCGCGCAGTGCGT-
 A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCYCGVGCATCSVGGT----
----GTACATCCGGATTTTT
 A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCYCGVGCATCSVGGT
CGCCCCCTGACA-------
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCYCGVGCATCSVGGT
GGCACGTGCC-------
 A C G T A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CCYCGVGCATCSVGGT---
----NCGCAGCGGGGGGTC
 A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCYCGVGCATCSVGGT
CGCCTCAGGCA-------
 A C G T A C G T A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CCYCGVGCATCSVGGT
------ACATCCTGNT
 A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CCYCGVGCATCSVGGT
ACATGCCCGGGCAT------
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CCYCGVGCATCSVGGT
CCAGGAACAG------
 A T G C A G T C A G T C A G T C A C T G T C G A C T A G A G T C C G T A A C G T A G T C A T C G T A G C C A T G C T A G A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T