p-value: | 1e-12 |
log p-value: | -2.903e+01 |
Information Content per bp: | 1.771 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 3.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 43.7 +/- 15.7bp |
Average Position of motif in Background | 52.5 +/- 19.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | SCMTCTTCATAAA--- ----NGYCATAAAWCH |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | SCMTCTTCATAAA-- -----GTCATAAAAN |
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PB0176.1_Sox5_2/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCMTCTTCATAAA--- -TATCATAATTAAGGA |
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CDX1/MA0878.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | SCMTCTTCATAAA- -----GCAATAAAA |
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HOXC10/MA0905.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | SCMTCTTCATAAA-- -----GTCGTAAAAT |
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PH0153.1_Prop1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | SCMTCTTCATAAA---- GNNTNTTAATTAATNCN |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | SCMTCTTCATAAA- ----CCYMATAAAA |
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PB0145.1_Mafb_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCMTCTTCATAAA--- -CAATTGCAAAAATAT |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | SCMTCTTCATAAA-- ----GGTAATAAAAA |
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PB0129.1_Glis2_2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | SCMTCTTCATAAA-- -AATATTAATAAAGA |
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