Information for 3-AGAMAAGSACCSGGGC (Motif 2)

C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A T C G A T C G A T C G A G C T A T G C A T G C A G C T A C G T A C G T A G C T A G T C A C G T
p-value:1e-13
log p-value:-3.072e+01
Information Content per bp:1.817
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.9 +/- 24.0bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAMAAGSACCSGGGC--
--NNAGGGACAAGGGCNC
 C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGAMAAGSACCSGGGC
ANAGATAAGAA-------
 A C G T A C G T C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AGAMAAGSACCSGGGC
NAGATAAGNN-------
 A C G T C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-AGAMAAGSACCSGGGC
CAGATAAGGN-------
 A C G T C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:AGAMAAGSACCSGGGC
----------CGGAGC
 C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

GATA2/MA0036.2/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--AGAMAAGSACCSGGGC
NCAGATAAGAANNN----
 A C G T A C G T C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-AGAMAAGSACCSGGGC
CATAAGACCACCATTAC
 A C G T C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AGAMAAGSACCSGGGC
AGATAAGA--------
 C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:AGAMAAGSACCSGGGC
----AAGCACATGG--
 C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---AGAMAAGSACCSGGGC
NNGAGATAAGA--------
 A C G T A C G T A C G T C G T A A C T G C T G A T G C A T C G A C T G A A T C G A T C G C T G A A T G C A T G C A T G C A C T G C T A G A C T G A G T C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T