Information for 4-CCGMAGGCTK (Motif 10)

A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T
Reverse Opposite:
G T C A G T C A C A T G A T G C G T A C A G C T A C T G T G A C A C T G T A C G
p-value:1e-10
log p-value:-2.329e+01
Information Content per bp:1.672
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif7.95%
Number of Background Sequences with motif1611.3
Percentage of Background Sequences with motif3.34%
Average Position of motif in Targets51.3 +/- 26.9bp
Average Position of motif in Background50.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCGMAGGCTK
AGCCTCAGGCA-
 A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCGMAGGCTK
AGCCTCAGGCA-
 A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCGMAGGCTK
CGCCTCAGGCA-
 A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CCGMAGGCTK-
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCGMAGGCTK
WTGSCCTSAGGS--
 A C G T A C G T A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCGMAGGCTK-
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCGMAGGCTK
ATGCCCTGAGGC--
 A C G T A C G T A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCGMAGGCTK
TGCCCCCGGGCA-
 A C G T A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCGMAGGCTK-
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCGMAGGCTK-
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A C G T A T G C T G A C A C T G G T A C T C G A C A T G T A C G G T A C C A G T A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T