Information for 1-GCGGCTTTTTGCC (Motif 1)

A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C
Reverse Opposite:
A C T G C A T G A G T C C G T A C T G A C G T A C G T A C G T A T A C G A G T C A G T C A C T G T A G C
p-value:1e-28
log p-value:-6.589e+01
Information Content per bp:1.908
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 28.3bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)2.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F2/MA0864.1/Jaspar

Match Rank:1
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCGGCTTTTTGCC
AAAATGGCGCCATTTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCGGCTTTTTGCC----
--ANATTTTTGCAANTN
 A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCTTTTTGCC
GGNGCGNCTGTTNNN-
 A C G T A C G T A C G T A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:4
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGCTTTTTGCC
AAAAATGGCGCCATTTTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCGGCTTTTTGCC
---YCTTTGTTCC
 A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGGCTTTTTGCC-
TTGGCATGGTGCCA
 A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCGGCTTTTTGCC--
CTTGGCANNNTGCCAA
 A C G T A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

SPI1/MA0080.4/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCGGCTTTTTGCC
TACTTCCGCTTTTT---
 A C G T A C G T A C G T A C G T A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCGGCTTTTTGCC--
-TGGCAGNCTGCCAG
 A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C A C G T A C G T
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCGGCTTTTTGCC----
---TTTTTTTTCNNGTN
 A C T G A G T C T A C G A C T G A T G C C G A T A C G T A C G T A G C T A C G T T A C G G A T C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A