Information for 4-TGKGGAAKCCWCS (Motif 5)

A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
Reverse Opposite:
A T C G A T C G C G T A A C T G A C T G G T C A C G A T A C G T A G T C A G T C G T A C A G T C C G T A
p-value:1e-11
log p-value:-2.744e+01
Information Content per bp:1.875
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.7 +/- 15.6bp
Average Position of motif in Background28.3 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGKGGAAKCCWCS
GGGGGAATCCCC-
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGKGGAAKCCWCS
AGGGGATTCCCCT
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGKGGAAKCCWCS
AGGGGAATCCCCT
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGKGGAAKCCWCS
TGGGGA-------
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGKGGAAKCCWCS
AGAGGAA------
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGKGGAAKCCWCS
---GGAAANCCCC
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGKGGAAKCCWCS
--GGAAATCCCC-
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGKGGAAKCCWCS-
--GGGAAATCCCCN
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGKGGAAKCCWCS--
---SSAATCCACANN
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C A C G T A C G T
A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGKGGAAKCCWCS
TGTGGATTNNN--
 A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C A G T C C G A T A T G C A T G C
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T