Information for 4-TTGCAGCGGACCV (Motif 7)

A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
Reverse Opposite:
A C T G A C T G A T C G A C G T A G T C A G T C A C T G A G T C A G C T A C T G A G T C G T C A G T C A
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.846
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 22.1bp
Average Position of motif in Background41.9 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTGCAGCGGACCV--
---NCGCGGACGTTG
 A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C A C G T A C G T
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGCAGCGGACCV
AGAGRRACAGCWGAC--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTGCAGCGGACCV
TCNCTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTGCAGCGGACCV
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTGCAGCGGACCV
TCNNTTTACAGCGNNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGCAGCGGACCV
---CAGCC-----
 A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTGCAGCGGACCV
-ANCAGCTG----
 A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTGCAGCGGACCV
--HCAGCTGDTN-
 A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGCAGCGGACCV-
-TGCAGCTGTCCCT
 A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C A C G T
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGCAGCGGACCV
-AACAGCTG----
 A C G T A C G T C T A G A G T C C T G A A C T G A G T C C T A G A C T G C G T A A T G C A G T C T A G C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T