Information for 2-GTATCGGAGARCG (Motif 3)

A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G
Reverse Opposite:
A G T C C A T G A G C T A C G T A G T C A C G T A G T C A G T C A C T G C G T A C G A T G T C A A T G C
p-value:1e-12
log p-value:-2.866e+01
Information Content per bp:1.825
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.9 +/- 19.1bp
Average Position of motif in Background45.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTATCGGAGARCG--
GNNACCGAGAATNNN
 A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GTATCGGAGARCG
NNNTTGGTTTCGNTNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTATCGGAGARCG
NTTTCTNAGAAA-
 A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GTATCGGAGARCG
NTNNCGTATCCAAGTNN-
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GTATCGGAGARCG
AATGTATCAAT-----
 A C G T A C G T A C G T A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTATCGGAGARCG
TGGTTTCAGT-----
 A C G T A C G T A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GTATCGGAGARCG
ACCCGTATCAAATTT--
 A C G T A C G T A C G T A C G T A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GTATCGGAGARCG
ATTTCCAAGAA--
 A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTATCGGAGARCG--
TCTTTCGAGGAATTTG
 A C G T A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTATCGGAGARCG--
NNNACCGAGAGTNNN
 A T C G A C G T C G T A A C G T A G T C C T A G C T A G T C G A A C T G C G T A C T G A G A T C A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T