Information for 3-GCDATCACCA (Motif 7)

A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A
Reverse Opposite:
C G A T A C T G T A C G C A G T A T C G G T C A A G C T G T A C A C T G T A G C
p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.478
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif247.9
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets46.3 +/- 28.6bp
Average Position of motif in Background49.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCDATCACCA
----TCCCCA
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A
A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCDATCACCA
----TGACCT
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCDATCACCA---
---ATCACCCCAC
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCDATCACCA-
NNACTTACCTN
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCDATCACCA--
SCTGTCARCACC
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCDATCACCA--
----TGACCYCT
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCDATCACCA--
----TGACCTYA
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCDATCACCA---
---ATCACCCCAT
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCDATCACCA----
----TGACCTTGAT
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCDATCACCA----
---GTCAGCANNTN
 A T C G T G A C C A T G T C G A A C G T T A G C G T C A A T G C T G A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T