Information for 8-AAAATTCATGAGC (Motif 14)

C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C C G A T T G A C C G T A G A C T A C T G T C G A C G T A C G A T C G A T A G C T A C G T
p-value:1e-6
log p-value:-1.541e+01
Information Content per bp:1.654
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif167.2
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets57.8 +/- 22.1bp
Average Position of motif in Background47.4 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAAATTCATGAGC--
-ACATTCATGACACG
 C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAAATTCATGAGC
ATGAATATTCATGAG-
 A C G T A C G T A C G T C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAAATTCATGAGC
GAATATTCAT----
 A C G T C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAATTCATGAGC
ATGCATAATTAATGAG-
 A C G T A C G T A C G T A C G T C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAATTCATGAGC
ATGCATAATTAATGAG-
 A C G T A C G T A C G T A C G T C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAAATTCATGAGC
ATGAATWATTCATGA--
 A C G T A C G T A C G T A C G T C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAATTCATGAGC--
AGTTATTAATGAGGTC
 A C G T C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAATTCATGAGC---
NAATTTTACGAGNTNN
 C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAATTCATGAGC---
NNAATTAATGACCNNN
 C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Lhx3/MA0135.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAATTCATGAGC-
-AAATTAATTAATC
 C G T A T C G A G C T A C G T A C G A T A C G T G T A C C G T A A C G T A C T G C G T A A C T G A G T C A C G T
A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C