Information for 1-TAAAATGGCG (Motif 6)

A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G
Reverse Opposite:
T A G C T C A G A T G C A G T C G T C A G C A T A G C T A C G T A C G T T C G A
p-value:1e-11
log p-value:-2.614e+01
Information Content per bp:1.687
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif6.51%
Number of Background Sequences with motif1136.3
Percentage of Background Sequences with motif2.37%
Average Position of motif in Targets49.1 +/- 25.3bp
Average Position of motif in Background51.8 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TAAAATGGCG--
CAAGATGGCGGC
 A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TAAAATGGCG--
CAAGATGGCGGC
 A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TAAAATGGCG---
--TAATGGCGGNC
 A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAAAATGGCG-------
-AAAATGGCGCCATTTT
 A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TAAAATGGCG--------
AAAAATGGCGCCATTTTT
 A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TAAAATGGCG---
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAAAATGGCG
NTCAAGTGGN-
 A C G T A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAAAATGGCG
TTAAGTGGN-
 A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAAAATGGCG
TTAAGTGGT-
 A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAAAATGGCG
DCYAAAAATAGM-
 A C G T A C G T A C G T A G C T T G C A C G T A T C G A C G T A C A G T A C T G T A C G A G T C A T C G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T