Information for 3-CGAGGCCGGCAGC (Motif 5)

A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C
Reverse Opposite:
A T C G G T A C A G C T A T C G A G T C G T A C A C T G A C T G A G T C T G A C C A G T G T A C A C T G
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.828
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif61.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets52.6 +/- 27.9bp
Average Position of motif in Background50.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGAGGCCGGCAGC
CTAGGCCT-----
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGAGGCCGGCAGC---
-ATTGCCTCAGGCAAT
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C A C G T A C G T A C G T
A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGAGGCCGGCAGC-----
---TGCCTGCGYCMCCTT
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGAGGCCGGCAGC--
----NCCGGAAGTGG
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGAGGCCGGCAGC
GGGGCCGAGGCCTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGAGGCCGGCAGC-
---NGCCTGAGGCN
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Gabpa/MA0062.2/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGAGGCCGGCAGC---
-----CCGGAAGTGGC
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGAGGCCGGCAGC-
----RCCGGAAGTD
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGAGGCCGGCAGC-
---TGCCTGAGGCN
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

BATF3/MA0835.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGAGGCCGGCAGC-
TGATGACGTCATCA
 A G T C A C T G G T C A A C T G A C T G A G T C A G T C A C T G A C T G A T G C C T G A A C T G A T G C A C G T
G A C T C A T G T C G A C G A T C A T G G T C A A G T C A C T G A C G T A G T C C G T A A G C T G A T C C T G A