Information for 2-BHGAGATCGG (Motif 11)

A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G
Reverse Opposite:
A T G C G A T C A C T G C T G A G C A T A G T C A C G T A G T C C T G A T G A C
p-value:1e-9
log p-value:-2.290e+01
Information Content per bp:1.710
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.38%
Number of Background Sequences with motif642.1
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets45.8 +/- 28.4bp
Average Position of motif in Background48.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:BHGAGATCGG
-TRAGGTCA-
 A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:BHGAGATCGG
-AGRGGTCA-
 A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:BHGAGATCGG
CAAAGGTCAG
 A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:BHGAGATCGG
--AAGGTCAC
 A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:BHGAGATCGG--
--GAGSCCGAGC
 A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G A C G T A C G T
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----BHGAGATCGG---
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---BHGAGATCGG
GGTTAGAGACCT-
 A C G T A C G T A C G T A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---BHGAGATCGG----
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:BHGAGATCGG
-TGACGTCA-
 A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G
A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:BHGAGATCGG---
CAAAGGTCAAGGG
 A C T G G A C T A C T G C G T A A C T G C G T A A G C T A G T C C T A G T A C G A C G T A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G