Information for 3-TTCAGAGGCCAGCAAA (Motif 4)

C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G T G A C C G A T A C T G C T A G T A G C A G T C C G A T A G T C C G A T A C T G G T C A C G T A
p-value:1e-11
log p-value:-2.659e+01
Information Content per bp:1.743
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.7 +/- 12.8bp
Average Position of motif in Background41.6 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTCAGAGGCCAGCAAA
TTGAGTGSTT------
 C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGAGGCCAGCAAA
CTYRAGTGSY-------
 A C G T C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTCAGAGGCCAGCAAA
BTBRAGTGSN-------
 A C G T C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGAGGCCAGCAAA
CTTGAGTGGCT------
 A C G T C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTCAGAGGCCAGCAAA
TTAAGTGGT-------
 C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TTCAGAGGCCAGCAAA
TTAAGTGGN-------
 C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TTCAGAGGCCAGCAAA---
---TAAGGTAATAAAATTA
 C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TTCAGAGGCCAGCAAA----
----AGAGCCATAAAATTCG
 C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PH0056.1_Hoxa9/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TTCAGAGGCCAGCAAA-----
----ACGGCCATAAAATTAAT
 C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TTCAGAGGCCAGCAAA
NNNANTGCAGTGCNNTT----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T G T A C C G T A A C T G G C T A C T A G A C T G A G T C G T A C C G T A A C T G A G T C C G T A G T C A C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T A C G T