Information for 12-TCAAGGCCCTCAA (Motif 19)

A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G G T C A A T C G A C T G A C T G A T G C A G T C G A C T G A C T A C T G C T G A
p-value:1e-7
log p-value:-1.837e+01
Information Content per bp:1.783
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.7 +/- 19.2bp
Average Position of motif in Background42.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCAAGGCCCTCAA-
---AGCCACTCAAG
 A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCAAGGCCCTCAA
-CTAGGCCT----
 A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCAAGGCCCTCAA
NTCAAGGTCA----
 A C G T A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCAAGGCCCTCAA
AAGTTCAAGGTCAGC--
 A C G T A C G T A C G T A C G T A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCAAGGCCCTCAA
BTCAAGGTCA----
 A C G T A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCAAGGCCCTCAA
---AASCACTCAA
 A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCAAGGCCCTCAA-
----NSCACTYVAV
 A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCAAGGCCCTCAA----
--AAGCCCCCCAAAAAT
 A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCAAGGCCCTCAA
--AAGACCCYYN-
 A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCAAGGCCCTCAA
-CNAGGCCT----
 A G C T A G T C C T G A C G T A A C T G A T C G G T A C A G T C T A G C A C G T A G T C G T C A C G T A
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T