Information for 21-GAGAAGTTCCAGT (Motif 40)

A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C T G A C T G C G T A C G T A A G T C A C G T A C G T A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.434e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 11.3bp
Average Position of motif in Background79.8 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGAAGTTCCAGT
GGGAATTTCC---
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

PB0020.1_Gabpa_1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGAAGTTCCAGT----
NNNNACTTCCGGTATNN
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T G A G T A C C T G A A G T C C G A T C G A T A G T C A G T C A C T G A T C G G A C T C G T A C G A T A C G T C A T G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAGAAGTTCCAGT-
----ATTTCCTGTN
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGAAGTTCCAGT
GGGAATTTCC---
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAGAAGTTCCAGT-
----ACTTCCGGTT
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGAAGTTCCAGT-
TGACANARRCCAGRC
 A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ERF/MA0760.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGAAGTTCCAGT
---CACTTCCGGT
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A T G C A G T C A C T G T C A G A G C T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAGAAGTTCCAGT-
----ACTTCCGGTN
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T

FLI1/MA0475.2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGAAGTTCCAGT
---CACTTCCGGT
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T G T A C G A T C A C T G A C T G G A C T

ELK3/MA0759.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGAAGTTCCAGT
---NACTTCCGGT
 A C T G C G T A A C T G C G T A C G T A A C T G A C G T A C G T A G T C A G T C C G T A A C T G A C G T
A C G T A C G T A C G T G A C T T C G A A G T C C G A T A C G T T G A C A G T C A C T G A C T G G A C T