Information for 16-CACATGTTGGCAA (Motif 35)

A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A
Reverse Opposite:
A G C T A C G T A T C G A G T C G T A C G T C A C G T A G T A C C T G A A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.4 +/- 21.2bp
Average Position of motif in Background63.1 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CACATGTTGGCAA-
----NNTTGGCANN
 A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CACATGTTGGCAA
-----CTTGGCAA
 A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CACATGTTGGCAA-
-----NTTGGCANN
 A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CACATGTTGGCAA
----TNNGGGCAG
 A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CACATGTTGGCAA
----GGTTGGCAT
 A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CACATGTTGGCAA
------TTGGCA-
 A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CACATGTTGGCAA---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CACATGTTGGCAA
----NGTGGGCAT
 A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACATGTTGGCAA
ACCATATGTT-----
 A C G T A C G T A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACATGTTGGCAA
AAGCACATGG------
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G C T A C T G C G A T A C G T A C T G A C T G A T G C C G T A C T G A
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T