Information for 19-GCGATCTTTGCCTTGG (Motif 34)

C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A G T C A C T A G A C T G A G T C C G T A C G T A C G T A C T A G C T G A A C G T A G T C A C T G A G T C
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.903
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 16.9bp
Average Position of motif in Background71.2 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGATCTTTGCCTTGG--
--NNTGTTTATTTTGGCA
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCGATCTTTGCCTTGG
-TGACCTTTGCCCTA-
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCGATCTTTGCCTTGG
-----BNTGDCCTTG-
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCGATCTTTGCCTTGG-----
-------TTGCCATGGCAACN
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGATCTTTGCCTTGG
-TGACCTTTGCCCTAN
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCGATCTTTGCCTTGG-
-------TGACCTTGAN
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCGATCTTTGCCTTGG-----
-------TTGCCATGGCAACC
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCGATCTTTGCCTTGG
-TGACCTTTNCNT---
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCGATCTTTGCCTTGG
----TRTTTACTTW--
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCGATCTTTGCCTTGG-
-------TGACCTTGAV
 C T A G G T A C C T A G C G T A A G C T A G T C A C G T A C G T A C G T A C T G A G T C G A T C A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A