Information for 18-AGCACATTTCACAGGA (Motif 33)

C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G C T A C T G A C G T A C T G C T G A G T C A C G T A A C G T A C T G A C G T A C T G A T G C A C G T
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 31.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGCACATTTCACAGGA----
-----ANTTCTCAGGAANNN
 C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCACATTTCACAGGA---
AACTACAATTCCCAGAATGC
 A C G T C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:forward strand
Alignment:AGCACATTTCACAGGA---
---------AACAGGAAGT
 C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AGCACATTTCACAGGA-
-------GTCACATGAY
 C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGCACATTTCACAGGA
-----HTTTCCCASG-
 C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCACATTTCACAGGA---
RACTACAACTCCCAGVAKGC
 A C G T C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGCACATTTCACAGGA
-----ACATCAAAGG-
 C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGCACATTTCACAGGA
-----ACWTCAAAGG-
 C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:AGCACATTTCACAGGA
---------CACAGN-
 C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGCACATTTCACAGGA-
-----ANTTCTNNAGAA
 C G T A A T C G A G T C C G T A A G T C G T C A A C G T C A G T A G C T A G T C C G T A A G T C C T G A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A