Information for 7-ATGTAGRTTYMST (Motif 18)

C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
Reverse Opposite:
C G T A A T C G A C G T C T G A C G T A C G T A A G C T A T G C A C G T C G T A A G T C C G T A A C G T
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.6 +/- 7.9bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGTAGRTTYMST
-TGTGGATTNNN-
 C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGTAGRTTYMST
NNTGTGGATTSS--
 A C G T C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------ATGTAGRTTYMST
TAAATACATGTAAAATT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTAGRTTYMST
NNTATTACATGTANNNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATGTAGRTTYMST
CTCATGAATATTCAT-
 A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:6
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTAGRTTYMST
ANTNNTACATGTANNTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTAGRTTYMST
ANTTNTACATGTANTTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGTAGRTTYMST
GAATGTTTGTTT---
 A C G T A C G T C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATGTAGRTTYMST
ATGAATATTC---
 C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:10
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTAGRTTYMST
NNTTTTACATGTANNNT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G A T C G T A A T C G C T G A A C G T A C G T A G C T G T C A A T G C A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T A C G T A C G T A C G T A C G T