Information for 8-GACAAGHHCT (Motif 12)

C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
Reverse Opposite:
C G T A C T A G C A T G C A T G G T A C A C G T A C G T A T C G A C G T A G T C
p-value:1e-13
log p-value:-3.070e+01
Information Content per bp:1.694
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif7.22%
Number of Background Sequences with motif925.8
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets47.8 +/- 29.4bp
Average Position of motif in Background49.5 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0011.1_HMG_class/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GACAAGHHCT
AACAAT----
 C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GACAAGHHCT
RNAACAATGG--
 A C G T A C G T C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GACAAGHHCT--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GACAAGHHCT
GTAAACAAT----
 A C G T A C G T A C G T C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GACAAGHHCT
RAACAATGGN-
 A C G T C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GACAAGHHCT-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACAAGHHCT
GACAATGNN-
 C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GACAAGHHCT
NVAGATAAGR---
 A C G T A C G T A C G T C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GACAAGHHCT
-ACAAAG---
 C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GACAAGHHCT
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T G C C G T A C G T A C A T G G T A C G T A C A G T C C G A T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T