Information for 10-YAMRGGCWSWGCTTKC (Motif 11)

A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
Reverse Opposite:
A C T G G T C A C G T A C T G A C T A G A G T C C G A T A T G C C G T A A C T G A G T C G T A C A G C T A C G T A C G T C T A G
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.819
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.2 +/- 27.7bp
Average Position of motif in Background63.7 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:YAMRGGCWSWGCTTKC
----TGCTGTGATTT-
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:YAMRGGCWSWGCTTKC
-----GCAGTGATTT-
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:YAMRGGCWSWGCTTKC
AGGGGGCGGGGCTG--
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:YAMRGGCWSWGCTTKC
----GKMTCADRTTWC
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:YAMRGGCWSWGCTTKC
----GKVTCADRTTWC
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:YAMRGGCWSWGCTTKC
------CNGTGATTTN
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:YAMRGGCWSWGCTTKC
TNNGGGCAG-------
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:YAMRGGCWSWGCTTKC---
---------TGGTTTCAGT
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:YAMRGGCWSWGCTTKC--
-AATCGCACTGCATTCCG
 A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-YAMRGGCWSWGCTTKC
GVACAGNMTGTYCTB--
 A C G T A G T C C G T A G T C A C T G A A C T G A C T G A G T C C G A T A T C G C G T A A C T G A G T C A G C T A C G T A C G T A G T C
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T