Information for 5-AGTCACACCT (Motif 9)

C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
Reverse Opposite:
G T C A A C T G C T A G A C G T A C T G A C G T A C T G G T C A A G T C A C G T
p-value:1e-8
log p-value:-1.914e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.19%
Number of Background Sequences with motif65.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets42.6 +/- 27.2bp
Average Position of motif in Background48.5 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:1
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:AGTCACACCT
--TCACACCT
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:AGTCACACCT
--TCACACCT
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:AGTCACACCT
--TCACACCT
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:AGTCACACCT
--TCACACCT
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:AGTCACACCT
--TCACACCT
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AGTCACACCT-
-TTCACACCTT
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AGTCACACCT-
NTTTTCACACCTT
 A C G T A C G T C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGTCACACCT
KTTCACACCT
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGTCACACCT
TTTCACACCT
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGTCACACCT-
CTTCACACCTA
 C G T A C T A G C A G T A G T C C G T A A G T C C G T A A G T C A G T C A C G T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A