Information for 4-CCGGGGCAGCCGG (Motif 7)

A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
Reverse Opposite:
A G T C A G T C A C T G A C T G G T A C A G C T A T C G G T A C A G T C A G T C A G T C A C T G A C T G
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.844
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 23.4bp
Average Position of motif in Background49.8 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGGGGCAGCCGG
CGCGCCGGGTCACGTA-
 A C G T A C G T A C G T A C G T A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCGGGGCAGCCGG
CCCCCCCGGGGGGGT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCGGGGCAGCCGG
WDNCTGGGCA-----
 A C G T A C G T A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCGGGGCAGCCGG------
---GTACATCCGGATTTTT
 A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCGGGGCAGCCGG
CCCCCCCGGGGGGGT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGGGGCAGCCGG
GTCCCCAGGGGA-----
 A C G T A C G T A C G T A C G T A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGGCAGCCGG
GTTGCCATGGCAACCG-
 A C G T A C G T A C G T A C G T A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCGGGGCAGCCGG
TTGCCATGGCAACN--
 A C G T A C G T A C G T A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCGGGGCAGCCGG
CACCCCCGGGGGGG----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CCGGGGCAGCCGG-
----NACTTCCGGT
 A G T C A G T C C T A G A C T G A C T G A C T G A T G C C T G A A C T G A G T C A G T C A C T G C T A G A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T