Information for 3-CACAACCGAG (Motif 5)

A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.910
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.7 +/- 3.9bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CACAACCGAG--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CACAACCGAG-
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACAACCGAG-
---AACCGANA
 A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G A C G T
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACAACCGAG
RNAACAATGG--
 A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CACAACCGAG-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACAACCGAG
GGCCACACCCAN-
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACAACCGAG
GCCACACCCA--
 A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CACAACCGAG
NWAACCACADNN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACAACCGAG
GGCCACACCCA--
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACAACCGAG
GCGACCACCGAA
 A C G T A C G T A G T C C G T A A G T C C G T A C G T A A G T C G T A C C T A G C G T A C T A G
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A