Information for 2-TTTGGAGCTTGAC (Motif 3)

A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A C T G A A C T G A G T C A C G T A G T C A G T C C G T A C G T A C T G A
p-value:1e-10
log p-value:-2.375e+01
Information Content per bp:1.943
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.12%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 20.9bp
Average Position of motif in Background56.7 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC---
ATTGGACTTTGACCCC
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC
-NATGACCTTGA-
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC
--CGGAGC-----
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC
----AAGCTTG--
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC-
------NCGTGACN
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGAGCTTGAC
TCAGNGAGCGTGAC
 A C G T A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC
---TGACCTTGAV
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC
---TGACCTTGAN
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC
--ATGACCTTGAA
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTTGGAGCTTGAC--
---TGACCTTGACCT
 A G C T C G A T A C G T A C T G A C T G C G T A A C T G A G T C A G C T A C G T A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T