Information for 7-TGGATRGCTC (Motif 14)

A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G G T C A A C T G A G T C A G C T C G T A A C G T A G T C A G T C C G T A
p-value:1e-5
log p-value:-1.154e+01
Information Content per bp:1.906
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif20.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.8 +/- 30.7bp
Average Position of motif in Background47.9 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGATRGCTC
GTTAATGGCC-
 A C G T A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGATRGCTC----
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGGATRGCTC
-----NGCTN
 A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGGATRGCTC--
------GCTCCG
 A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGGATRGCTC---
GTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGGATRGCTC
TGATTRATGGCY-
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGATRGCTC---
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

FOSL2/MA0478.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGATRGCTC--
-GGATGACTCAT
 A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C A C G T A C G T
A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGATRGCTC---
-GGATGACTCATC
 A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGATRGCTC---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C G T C T G A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T