Information for 7-TTMMARTVGKTCT (Motif 13)

A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
Reverse Opposite:
C G T A C A T G C G T A T G A C G A T C A T C G C G T A A G T C A C G T A C T G A C T G T C G A T G C A
p-value:1e-5
log p-value:-1.166e+01
Information Content per bp:1.476
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif10.31%
Number of Background Sequences with motif859.3
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets47.1 +/- 25.7bp
Average Position of motif in Background50.5 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTMMARTVGKTCT
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTMMARTVGKTCT
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTMMARTVGKTCT
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTMMARTVGKTCT
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTMMARTVGKTCT
NATTCAAAT------
 A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TTMMARTVGKTCT
CGGTTTCAAA-------
 A C G T A C G T A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TTMMARTVGKTCT
TTTTCCA--------
 A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TTMMARTVGKTCT
ATTTTCCATT------
 A C G T A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TTMMARTVGKTCT
ATTTTCCATT------
 A C G T A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TTMMARTVGKTCT
ATTTTCCATT------
 A C G T A C G T A C G T A C G T A G C T T G A C T G A C T G C A T C A G G C A T T A G C C T A G A C T G G C A T G T A C G C A T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T