Information for 4-TTCCTGTSTGTCTCTC (Motif 12)

A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C
Reverse Opposite:
T A C G C G T A A T C G C T G A A C T G C G T A A T G C G T C A T A G C G T C A A T G C C G T A A T C G C T A G C T G A T C G A
p-value:1e-5
log p-value:-1.379e+01
Information Content per bp:1.629
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif8.25%
Number of Background Sequences with motif380.3
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets40.9 +/- 23.9bp
Average Position of motif in Background51.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TTCCTGTSTGTCTCTC------
-------ACCACTCTCGGTCAC
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TTCCTGTSTGTCTCTC------
-------AGTATTCTCGGTTGC
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TTCCTGTSTGTCTCTC------
-------NNAATTCTCGNTNAN
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.53
Offset:9
Orientation:forward strand
Alignment:TTCCTGTSTGTCTCTC-
---------CTGTCTGG
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:TTCCTGTSTGTCTCTC-
-------VBSYGTCTGG
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTGTSTGTCTCTC
ANTCCTTTGTCTNNNN-
 A C G T A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TTCCTGTSTGTCTCTC
-------YSTTATCT-
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TTCCTGTSTGTCTCTC----
-------CTGTCTGTCACCT
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TTCCTGTSTGTCTCTC-
------TTCTTATCTGT
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:TTCCTGTSTGTCTCTC-
-----GSCTGTCACTCA
 A G C T G A C T A G T C A T G C G C A T A T C G A C G T A T C G A C G T A T C G C G A T A G T C A G C T A T G C C G A T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A