Information for 6-GCGCTGGVGTAVC (Motif 11)

A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C
Reverse Opposite:
C T A G A C G T A C G T C G T A A T G C A G T C A T G C A G T C C G T A A C T G A G T C C T A G A G T C
p-value:1e-6
log p-value:-1.599e+01
Information Content per bp:1.783
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.12%
Number of Background Sequences with motif21.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.7 +/- 29.5bp
Average Position of motif in Background38.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGCTGGVGTAVC
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCGCTGGVGTAVC
--GCTGTG-----
 A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGCTGGVGTAVC
-NGCTN-------
 A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTGGVGTAVC--
TGACCTNTAGTAACCC
 A C G T A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C A C G T A C G T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCGCTGGVGTAVC-----
TGACCTAAAGTAACCTCTG
 A C G T A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCGCTGGVGTAVC----
TCTTTGGCGTACCCTAA
 A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCGCTGGVGTAVC--
---GTGGCGTGACNG
 A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C A C G T A C G T
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCGCTGGVGTAVC
-CGGTGACGTCAC
 A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C
A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCGCTGGVGTAVC
GGTCTGGCAT---
 A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCGCTGGVGTAVC
---ATGGGGTGAT
 A C T G A G T C C T A G A G T C A C G T A C T G A T C G T A C G A T C G A C G T G T C A T C G A A G T C
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T