p-value: | 1e-7 |
log p-value: | -1.701e+01 |
Information Content per bp: | 1.939 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 2.92% |
Number of Background Sequences with motif | 12.8 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 48.2 +/- 11.9bp |
Average Position of motif in Background | 37.2 +/- 20.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFIA/MA0670.1/Jaspar
Match Rank: | 1 |
Score: | 0.82 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGCCAAATTG GGTGCCAAGT-- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 2 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGCCAAATTG CGTGCCAAG--- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 3 |
Score: | 0.76 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCCAAATTG TGCCAA---- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCCAAATTG TTGCCAAG--- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCCAAATTG ATGCCAACC-- |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGCCAAATTG-- ACTATGCCAACCTACC |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGCCAAATTG TGTCANYT-- |
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NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCCAAATTG------ TGCCAAAATAAACANN |
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PB0145.1_Mafb_2/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGCCAAATTG- CAATTGCAAAAATAT |
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HIC2/MA0738.1/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCCAAATTG ATGCCCACC-- |
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