Information for 5-SAGCCAGGCAGGCAGA (Motif 6)

A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
Reverse Opposite:
C G A T A G T C A G C T A T C G A G T C A G T C A C G T A C T G G T A C A G T C C G A T C T A G T A C G T A G C A C G T A T C G
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.666
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif10.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets57.7 +/- 24.0bp
Average Position of motif in Background45.6 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-SAGCCAGGCAGGCAGA
SCAGYCADGCATGAC--
 A C G T A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:SAGCCAGGCAGGCAGA
-TBGCACGCAA-----
 A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:SAGCCAGGCAGGCAGA-
-------ACAGGAAGTG
 A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.52
Offset:7
Orientation:forward strand
Alignment:SAGCCAGGCAGGCAGA-
-------ACAGGAAGTG
 A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:SAGCCAGGCAGGCAGA
-TGGCAGNCTGCCAG-
 A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.50
Offset:6
Orientation:forward strand
Alignment:SAGCCAGGCAGGCAGA
------NACCGGAAGT
 A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:SAGCCAGGCAGGCAGA
----CACGCA------
 A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:SAGCCAGGCAGGCAGA
-AGCCACTCAAG----
 A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:SAGCCAGGCAGGCAGA
------AACCGGAAGT
 A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-SAGCCAGGCAGGCAGA
SCTGTCAVTCAV-----
 A C G T A T G C T C G A A T C G A T G C A G T C C G T A T A C G C A T G T G A C G T C A C T A G C T A G T A G C C T G A T C A G G C T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T