Information for 3-SYTGAGWTMMWSMYRG (Motif 3)

A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
Reverse Opposite:
A G T C A G C T C T A G A C G T A T C G C G A T A C T G C A T G T C G A C G A T A G T C A C G T G T A C C G T A C T A G A T G C
p-value:1e-11
log p-value:-2.591e+01
Information Content per bp:1.734
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.4 +/- 27.3bp
Average Position of motif in Background54.5 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:SYTGAGWTMMWSMYRG
CTTGAGTGGCT-----
 A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:SYTGAGWTMMWSMYRG
--TGAGTGACAGSC--
 A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:SYTGAGWTMMWSMYRG
-ATGACGTCATCN---
 A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-SYTGAGWTMMWSMYRG
TGCTGAGTCA-------
 A C G T A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-SYTGAGWTMMWSMYRG
NRRTGACGTCAT-----
 A C G T A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---SYTGAGWTMMWSMYRG
AAAGATGATGTCATC----
 A C G T A C G T A C G T A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-SYTGAGWTMMWSMYRG
TGCTGACTCA-------
 A C G T A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:SYTGAGWTMMWSMYRG
-NTGATTGACAGN---
 A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--SYTGAGWTMMWSMYRG
HTGCTGAGTCAT------
 A C G T A C G T A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:SYTGAGWTMMWSMYRG
-BTGABTGACAGS---
 A T C G A G T C A C G T A C T G C G T A C T A G C G T A A C G T G T A C G T A C C G T A A T G C T G C A G A T C C T G A C T A G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T