Information for 6-AGATAAATGA (Motif 19)

C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A
Reverse Opposite:
A G C T A G T C G T C A C G A T A C G T G A C T G T C A A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.835
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif42.4
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets45.2 +/- 28.4bp
Average Position of motif in Background45.2 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGATAAATGA--
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGATAAATGA-
-GCTAAACGGT
 C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

GATA3/MA0037.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGATAAATGA
AGATAAGA--
 C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGATAAATGA
TGATTGATGA
 C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGATAAATGA--
TGATTRATGGCY
 C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A A C G T A C G T
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGATAAATGA
AGATAASR--
 C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGATAAATGA-----
ACTATGAATGAATGAT
 A C G T C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A A C G T A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGATAAATGA
ANAGATAAGAA-
 A C G T A C G T C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGATAAATGA----
AGTTATTAATGAGGTC
 A C G T A C G T C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A A C G T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGATAAATGA
NAGATAAGNN-
 A C G T C G T A T C A G G T C A C A G T C G T A C G T A C G T A C A G T C T A G C T G A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T