Information for 6-TRGRTGGCKY (Motif 17)

A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C
Reverse Opposite:
C T A G G T A C A C T G A G T C A G T C C G T A A G C T A G T C A G T C C G T A
p-value:1e-4
log p-value:-9.687e+00
Information Content per bp:1.852
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif5.17%
Number of Background Sequences with motif61.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.2 +/- 28.4bp
Average Position of motif in Background49.7 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TRGRTGGCKY---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TRGRTGGCKY
-GGTTGGCAT
 A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TRGRTGGCKY
CGTGGGTGGTCC
 A C G T A C G T A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Atf3/MA0605.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TRGRTGGCKY
--GATGACGT
 A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C
A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TRGRTGGCKY-
--NTTGGCANN
 A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TRGRTGGCKY
---TTGGCA-
 A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TRGRTGGCKY---
-----GGCGCGCT
 A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TRGRTGGCKY
AACAGATGGC--
 A C G T A C G T A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TRGRTGGCKY---
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TRGRTGGCKY--
-TAATGGCGGNC
 A C G T C T A G A C T G C T G A A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C