Information for 5-ACTTATABAC (Motif 16)

C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T T G C A A C G T C G T A A C G T G T C A C G T A A T C G A C G T
p-value:1e-5
log p-value:-1.266e+01
Information Content per bp:1.863
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif6.90%
Number of Background Sequences with motif80.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets61.8 +/- 23.8bp
Average Position of motif in Background47.0 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBP/MA0108.2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ACTTATABAC
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ACTTATABAC
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTTATABAC----
ANANNTGATACCCNATN
 A C G T A C G T A C G T C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------ACTTATABAC
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTTATABAC--
GGTTAGAGACCT
 C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTTATABAC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTTATABAC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTTATABAC----
AATNTTGATACCCTATN
 A C G T A C G T A C G T C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTTATABAC----
ANNNATGATACCCCATC
 A C G T A C G T A C G T C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTTATABAC-
NTTGATACATT
 C G T A A T G C A C G T C A G T C G T A A C G T C G T A A C G T C G T A A G T C A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T