Information for 7-ATCTTGCTGTCCG (Motif 13)

C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C T G C G T A A C G T
p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.5 +/- 27.9bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTGCTGTCCG-
NNTCCTGCTGTGNNN
 A C G T C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATCTTGCTGTCCG
AATTTGCTGAC--
 C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTGCTGTCCG-
TNTCCTGCTGTGNNG
 A C G T C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATCTTGCTGTCCG
-----GCTGTG--
 C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCTTGCTGTCCG
-ACTTCCTGTT--
 C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G
A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATCTTGCTGTCCG---
AAATTTGCTGACTTAGA
 A C G T C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTGCTGTCCG-
TCNCCTGCTGNGNNN
 A C G T C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTGCTGTCCG
CCCCCTGCTGTG--
 A C G T C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATCTTGCTGTCCG
--CCTGCTGAGH-
 C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATCTTGCTGTCCG
AAAATGCTGACT-
 C G T A A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C T G A C G T A G T C A G T C A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T