Information for 2-CTGGATGGCGCTGGGG (Motif 3)

A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C G T A C C G T A A T C G A G T C C T A G A G T C A G T C G T C A A C G T A G T C A G T C C G T A T C A G
p-value:1e-8
log p-value:-2.051e+01
Information Content per bp:1.863
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.7 +/- 29.1bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGGATGGCGCTGGGG--
--NNNTGGCAGTTGGTNN
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G A C G T A C G T
A C G T A C G T C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTGGATGGCGCTGGGG
NGTAGGTTGGCATNNN--
 A C G T A C G T A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGGATGGCGCTGGGG
--TAATGGCGGNC---
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CTGGATGGCGCTGGGG
-----TGGCAGTTGG-
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CTGGATGGCGCTGGGG
--GGTTGGCAT-----
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------CTGGATGGCGCTGGGG
TGGCCACCAGGTGGCACTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTGGATGGCGCTGGGG--
---GGGGGGGGGGGGGGA
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTGGATGGCGCTGGGG--
---CACGGCAGTTGGTNN
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGGATGGCGCTGGGG-
NAGANTGGCGGGGNGNA
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTGGATGGCGCTGGGG
GTGGAT----------
 A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C C T A G A T G C A C G T A C T G C T A G A C T G A C T G
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T