Information for 2-CAGSAGCCSTTWSTCC (Motif 2)

G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A T A C G C G T A G T C A T G C A A T G C C T A G C T A G A G T C A C G T A T G C A G T C A G C T A C T G
p-value:1e-12
log p-value:-2.934e+01
Information Content per bp:1.710
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif12.77%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets40.0 +/- 18.9bp
Average Position of motif in Background44.5 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGSAGCCSTTWSTCC
-AGCAGCTGCT-----
 G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CAGSAGCCSTTWSTCC
NNAGCAGCTGCT-----
 A C G T G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAGSAGCCSTTWSTCC-
CAKCTGKYCYYTTYCCC
 G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CAGSAGCCSTTWSTCC-----
----AATCGTTAATCCCTTTA
 G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CAGSAGCCSTTWSTCC----
----ANTCCTTTGTCTNNNN
 G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CAGSAGCCSTTWSTCC-
-------CNGTCCTCCC
 G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CAGSAGCCSTTWSTCC
--------GCTAATCC
 G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CAGSAGCCSTTWSTCC
ATGTACAGTAGCAAAG-----
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.47
Offset:10
Orientation:forward strand
Alignment:CAGSAGCCSTTWSTCC-
----------TTTTCCA
 G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:CAGSAGCCSTTWSTCC-
-NAGAACAGNCTGTNCT
 G T A C C T G A A C T G A T C G G T C A C T A G A G T C G A T C A T C G A C G T A C G T C G A T A T G C A C G T A G T C A G T C A C G T
A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T