Information for 2-GGGAGCVCCTCAAAGG (Motif 2)

C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G C T C G A T C T A G G T C A A C T G A C T G A C T G A C T G A T G C A G C T A G T C A G T C A G T C
p-value:1e-16
log p-value:-3.700e+01
Information Content per bp:1.795
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.58%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.4 +/- 14.5bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGGAGCVCCTCAAAGG
------ACWTCAAAGG
 C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGAGCVCCTCAAAGG
TTGGGGGCGCCCCTAG--
 A C G T A C G T C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GGGAGCVCCTCAAAGG
------ACATCAAAGG
 C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GGGAGCVCCTCAAAGG--
------ACATCAAAGGNA
 C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGGAGCVCCTCAAAGG
GGGAGGACNG------
 C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGGAGCVCCTCAAAGG--
----AAAGATCAAAGGAA
 C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GGGAGCVCCTCAAAGG--
-----TGCCCTNAGGGCA
 C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GGGAGCVCCTCAAAGG
CATAAGACCACCATTAC--
 A C G T A C G T A C G T C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GGGAGCVCCTCAAAGG
CGGAGC----------
 C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GGGAGCVCCTCAAAGG
----GNCTATAAAAGG
 C T A G A C T G A C T G C T G A A T C G T G A C T A G C A G T C A G T C A C G T A G T C C G T A C T G A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G