Information for 7-CCACAACACTTACCCC (Motif 13)

A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G C G A T C G T A C G T A A C T G C G A T A T C G C A G T A G C T A C T G A C G T A C T G A C T G
p-value:1e-5
log p-value:-1.353e+01
Information Content per bp:1.930
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 20.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCACAACACTTACCCC
--ACTACAATTCCC--
 A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCACAACACTTACCCC
-----NNACTTACCTN
 A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCACAACACTTACCCC
----ACCACTTAA---
 A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCACAACACTTACCCC
----ACCACTTAA---
 A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCACAACACTTACCCC
CAAACAACAACACCT-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCACAACACTTACCCC
NWAACCACADNN--------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCACAACACTTACCCC
---AAGCACTTAA---
 A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCACAACACTTACCCC
AACACCAAAACAAAGGA---
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCACAACACTTACCCC
AAACCACAGAN--------
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCACAACACTTACCCC
AAACCACAGC---------
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C T G A G C T A A T G C C G T A A G T C A C G T A C G T C G T A A G T C A G T C A G T C A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T