Information for 3-GAATGCACAG (Motif 11)

T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G
Reverse Opposite:
T G A C A C G T A C T G A C G T A C T G G T A C C G T A A C G T C G A T A G T C
p-value:1e-7
log p-value:-1.797e+01
Information Content per bp:1.880
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif21.21%
Number of Background Sequences with motif1265.4
Percentage of Background Sequences with motif3.15%
Average Position of motif in Targets47.2 +/- 32.9bp
Average Position of motif in Background49.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GAATGCACAG
TCCAATCCACA-
 A C G T A C G T T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GAATGCACAG-
SSAATCCACANN
 A C G T T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAATGCACAG---
ATATGCAAATNNN
 T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAATGCACAG
CCWGGAATGY----
 A C G T A C G T A C G T A C G T T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAATGCACAG
NTGGAATGTG---
 A C G T A C G T A C G T T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAATGCACAG
NTGGAATGTN---
 A C G T A C G T A C G T T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAATGCACAG---
-TATGCWAATBAV
 T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G A C G T A C G T A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAATGCACAG
TGGAATGT----
 A C G T A C G T T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAATGCACAG
TTATGCAAAT
 T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAATGCACAG----
TTGTATGCAAATTAGA
 A C G T A C G T T C A G C G T A C G T A A C G T C A T G A G T C C G T A G T A C G T C A A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A