Information for 1-GGCCCCCTAGATGACA (Motif 1)

A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A G T C G T C A A G C T G A T C A G C T C G T A C T A G C T A G C T A G C T A G T C A G A G T C A G T C
p-value:1e-31
log p-value:-7.300e+01
Information Content per bp:1.822
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif15.15%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 13.6bp
Average Position of motif in Background64.7 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GGCCCCCTAGATGACA
--------ARNTGACA
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

Znf423/MA0116.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCCCCCTAGATGACA
GGCACCCAGGGGTGC-
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.58
Offset:10
Orientation:forward strand
Alignment:GGCCCCCTAGATGACA-
----------TTGACAG
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.57
Offset:10
Orientation:forward strand
Alignment:GGCCCCCTAGATGACA--
----------TTGACAGG
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:GGCCCCCTAGATGACA-
---------RHTGWCAR
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GGCCCCCTAGATGACA
--------AGGTGTCA
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GGCCCCCTAGATGACA
---------CATGAC-
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCCCCCTAGATGACA----
TGGCCACCAGGTGGCACTNT
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCCCCCTAGATGACA-
TGACCTTTGCATGACCT
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A A C G T
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.52
Offset:10
Orientation:forward strand
Alignment:GGCCCCCTAGATGACA--
----------TTGACAGC
 A C T G A C T G A G T C A G T C A G T C A G T C A G T C G C A T C T G A C A T G C T G A A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C