Information for 5-TTGGTTGAGT (Motif 7)

A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T T G A C C G T A C G T A A T G C G T A C C G T A C T G A
p-value:1e-5
log p-value:-1.200e+01
Information Content per bp:1.897
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif17.14%
Number of Background Sequences with motif1724.0
Percentage of Background Sequences with motif3.55%
Average Position of motif in Targets53.2 +/- 30.3bp
Average Position of motif in Background50.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGTTGAGT--
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTGGTTGAGT----
---CTTGAGTGGCT
 A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGGTTGAGT-
TTTGATTGATGN
 A C G T A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTGGTTGAGT----
----TTGAGTGSTT
 A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTGGTTGAGT---
---CTYRAGTGSY
 A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGGTTGAGT
TTGATTGN--
 A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTGGTTGAGT----
----TTRAGTGSYK
 A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGGTTGAGT---
---BTBRAGTGSN
 A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGGTTGAGT
GTGGGGTGAT-
 A C G T A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTTGAGT-
CTGATTGGTCNATTT
 A C G T A C G T A C G T A C G T A G C T G C A T A C T G A T C G C G A T A C G T A C T G C G T A A T C G A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T